TM4 microarray software suite.

نویسندگان

  • Alexander I Saeed
  • Nirmal K Bhagabati
  • John C Braisted
  • Wei Liang
  • Vasily Sharov
  • Eleanor A Howe
  • Jianwei Li
  • Mathangi Thiagarajan
  • Joseph A White
  • John Quackenbush
چکیده

Powerful specialized software is essential for managing, quantifying, and ultimately deriving scientific insight from results of a microarray experiment. We have developed a suite of software applications, known as TM4, to support such gene expression studies. The suite consists of open-source tools for data management and reporting, image analysis, normalization and pipeline control, and data mining and visualization. An integrated MIAME-compliant MySQL database is included. This chapter describes each component of the suite and includes a sample analysis walk-through.

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عنوان ژورنال:
  • Methods in enzymology

دوره 411  شماره 

صفحات  -

تاریخ انتشار 2006